SNPkit is an R package designed for manipulation, organization, and analysis of genotypic data, with a strong focus on integration with tools such as FImpute and PLINK.
It provides robust S4-based data structures for storing genotypes and marker maps, along with functions to combine different genotype panels, summarize data, and prepare files for imputation and selection pipelines.
📦 Installation
Install the stable release from CRAN:
install.packages("SNPkit")Or install the development version (latest features) from GitHub:
# install.packages("devtools")
devtools::install_github("viniciusjunqueira/SNPkit")📖 Documentation
The full package website with detailed function reference and vignettes is available at:
Key pages:
📄 License
SNPkit is licensed under the GPL-3 license.
