Check Sample Call Rate

Source: R/qcSamples.R

Identifies samples with call rate below a given threshold.

check.sample.call.rate(sample.summary, min.call.rate)

Arguments

sample.summary

A data frame with a "Call.rate" column for each sample.

min.call.rate

Minimum acceptable call rate (between 0 and 1).

Value

A character vector with the names of samples to remove.