SNPtools is an R package designed for manipulation, organization, and analysis of genotypic data, with a strong focus on integration with tools such as FImpute and PLINK.
It provides robust S4-based data structures for storing genotypes and marker maps, along with functions to combine different genotype panels, summarize data, and prepare files for imputation and selection pipelines.
📦 Installation
To install directly from GitHub, use the devtools package:
# Install devtools if not already installed
install.packages("devtools")
# Install SNPtools from GitHub
devtools::install_github("viniciusjunqueira/SNPtools")
